Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 DGCR5-201ENST00000399539 862 ntBASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 SDHAP3-202ENST00000515467 728 ntBASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 CHCHD2P3-201ENST00000603038 451 ntBASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 MIR6069-201ENST00000620069 79 ntBASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 AC004461.2-201ENST00000629517 803 ntBASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 AL136982.4-201ENST00000437689 1740 ntBASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRG3Q9Y2Y8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 AC093004.1-201ENST00000508850 424 ntBASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 WASH4P-201ENST00000564273 1246 ntBASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 LETM1P2-201ENST00000597330 2178 ntBASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 AC008494.3-201ENST00000606615 944 ntBASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 CU639417.3-201ENST00000624240 1404 ntBASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PRG3Q9Y2Y8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRG3Q9Y2Y8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 AC087499.6-201ENST00000411576 835 ntBASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 AL589987.1-201ENST00000453380 819 ntBASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 MIR4321-201ENST00000592276 80 ntBASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 SRD5A3P1-201ENST00000603021 949 ntBASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 AC007431.3-201ENST00000623221 587 ntBASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRG3Q9Y2Y8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms