Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.27
RCL1Q9Y2P8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
RCL1Q9Y2P8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 AL590787.1-201ENST00000568856 1315 ntBASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 AC139749.1-202ENST00000617529 3139 ntBASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 AC092919.2-201ENST00000623631 1645 ntBASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 MPDU1-223ENST00000582151 728 ntBASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 TP73-AS1-210ENST00000637775 1455 ntBASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CICP4-201ENST00000447359 2812 ntBASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RCL1Q9Y2P8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 TSPY5P-201ENST00000426936 936 ntBASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 VENTXP7-201ENST00000475503 772 ntBASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AP005901.3-202ENST00000581653 237 ntBASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AP006294.2-201ENST00000641667 209 ntBASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AC023908.3-201ENST00000564211 3047 ntBASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms