Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 LINC00982-205ENST00000420957 435 ntBASIC14.43□□□□□ -0.1
DUX4Q9UBX2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 AC012640.2-201ENST00000561606 901 ntBASIC14.43□□□□□ -0.1
DUX4Q9UBX2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 MIR7706-201ENST00000613747 67 ntBASIC14.43□□□□□ -0.1
DUX4Q9UBX2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 MIR193BHG-211ENST00000641433 5365 ntBASIC14.43□□□□□ -0.1
DUX4Q9UBX2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
DUX4Q9UBX2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 AC026396.1-201ENST00000419388 421 ntBASIC14.42□□□□□ -0.1
DUX4Q9UBX2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 AF186996.4-201ENST00000467186 377 ntBASIC14.42□□□□□ -0.1
DUX4Q9UBX2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
DUX4Q9UBX2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms