Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSFQ9UBX1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.33■□□□□ 0.04
CTSFQ9UBX1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSFQ9UBX1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 CETN4P-206ENST00000642099 2168 ntBASIC15.32■□□□□ 0.04
CTSFQ9UBX1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 MIR661-201ENST00000384842 89 ntBASIC15.32■□□□□ 0.04
CTSFQ9UBX1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.32■□□□□ 0.04
CTSFQ9UBX1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.32■□□□□ 0.04
CTSFQ9UBX1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AL133215.2-201ENST00000609242 977 ntBASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AL590560.3-201ENST00000623350 461 ntBASIC15.32■□□□□ 0.04
CTSFQ9UBX1 ALOX12P2-203ENST00000570921 1945 ntBASIC15.32■□□□□ 0.04
CTSFQ9UBX1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSFQ9UBX1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 RPL37AP1-201ENST00000412502 279 ntBASIC15.31■□□□□ 0.04
CTSFQ9UBX1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 TSSK5P-201ENST00000423978 907 ntBASIC15.31■□□□□ 0.04
CTSFQ9UBX1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 AC004890.2-204ENST00000481968 304 ntBASIC15.31■□□□□ 0.04
CTSFQ9UBX1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 TEX28P1-201ENST00000613479 1221 ntBASIC15.31■□□□□ 0.04
CTSFQ9UBX1 TEX28P2-201ENST00000617764 1221 ntBASIC15.31■□□□□ 0.04
CTSFQ9UBX1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSFQ9UBX1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms