Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 GK-202ENST00000378941 458 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 DOC2GP-202ENST00000514950 1163 ntBASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 UBALD1-205ENST00000590891 2641 ntBASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 HLA-A-202ENST00000376806 1854 ntBASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 AC078925.2-201ENST00000624013 1973 ntBASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 SPDYE19P-201ENST00000338590 713 ntBASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 SDHAP3-202ENST00000515467 728 ntBASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 AC140912.1-201ENST00000577171 1054 ntBASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 MIR4321-201ENST00000592276 80 ntBASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIT1Q9P2V4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms