Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL20A1Q9P218 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL20A1Q9P218 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL20A1Q9P218 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL20A1Q9P218 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL20A1Q9P218 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL20A1Q9P218 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL20A1Q9P218 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 DGCR5-201ENST00000399539 862 ntBASIC18.27■□□□□ 0.52
COL20A1Q9P218 NME2P1-201ENST00000426182 414 ntBASIC18.27■□□□□ 0.52
COL20A1Q9P218 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 AC140912.1-201ENST00000577171 1054 ntBASIC18.27■□□□□ 0.52
COL20A1Q9P218 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 AL662844.4-201ENST00000606367 2838 ntBASIC18.27■□□□□ 0.52
COL20A1Q9P218 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL20A1Q9P218 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.27■□□□□ 0.52
COL20A1Q9P218 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL20A1Q9P218 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL20A1Q9P218 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
COL20A1Q9P218 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
COL20A1Q9P218 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL20A1Q9P218 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL20A1Q9P218 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
COL20A1Q9P218 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL20A1Q9P218 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC134407.2-201ENST00000625089 1978 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 KRT8P37-201ENST00000451609 1420 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC074338.1-201ENST00000416825 156 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC243562.2-201ENST00000561247 970 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC092337.1-201ENST00000568699 1129 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 LINC01115-203ENST00000606068 577 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 AC074044.1-201ENST00000609673 707 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 SLC7A15P-201ENST00000424028 1363 ntBASIC18.26■□□□□ 0.51
COL20A1Q9P218 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.26■□□□□ 0.51
COL20A1Q9P218 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL20A1Q9P218 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 AC063926.2-201ENST00000623766 1308 ntBASIC18.25■□□□□ 0.51
COL20A1Q9P218 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 AC093004.1-201ENST00000508850 424 ntBASIC18.25■□□□□ 0.51
COL20A1Q9P218 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 AC008494.3-201ENST00000606615 944 ntBASIC18.25■□□□□ 0.51
COL20A1Q9P218 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms