Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
HACD3Q9P035 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.52■□□□□ 0.24
HACD3Q9P035 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 U82695.1-201ENST00000635752 1889 ntBASIC16.52■□□□□ 0.24
HACD3Q9P035 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.52■□□□□ 0.24
HACD3Q9P035 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.52■□□□□ 0.24
HACD3Q9P035 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HACD3Q9P035 AC007326.2-201ENST00000624224 7579 ntBASIC16.52■□□□□ 0.24
HACD3Q9P035 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HACD3Q9P035 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 HTR5BP-201ENST00000430851 1154 ntBASIC16.52■□□□□ 0.24
HACD3Q9P035 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.52■□□□□ 0.24
HACD3Q9P035 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.52■□□□□ 0.24
HACD3Q9P035 AC005829.1-201ENST00000570002 483 ntBASIC16.52■□□□□ 0.24
HACD3Q9P035 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.52■□□□□ 0.24
HACD3Q9P035 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HACD3Q9P035 AC068587.6-202ENST00000641839 5619 ntBASIC16.52■□□□□ 0.24
HACD3Q9P035 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HACD3Q9P035 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HACD3Q9P035 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
HACD3Q9P035 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.52■□□□□ 0.23
HACD3Q9P035 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HACD3Q9P035 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HACD3Q9P035 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HACD3Q9P035 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.52■□□□□ 0.23
HACD3Q9P035 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HACD3Q9P035 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 MTHFR-217ENST00000641820 1569 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.51■□□□□ 0.23
HACD3Q9P035 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 AC005622.1-201ENST00000636801 1703 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.51■□□□□ 0.23
HACD3Q9P035 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HACD3Q9P035 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.51■□□□□ 0.23
HACD3Q9P035 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 TFAMP1-201ENST00000412727 736 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 BX842568.4-201ENST00000421222 227 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 ADH5P3-201ENST00000433842 1137 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 AC093724.1-201ENST00000448659 1027 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.51■□□□□ 0.23
HACD3Q9P035 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 AL135744.1-201ENST00000565098 629 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 MIR3687-2-201ENST00000577708 61 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 MIR3687-1-201ENST00000614492 61 ntBASIC16.51■□□□□ 0.23
HACD3Q9P035 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.51■□□□□ 0.23
HACD3Q9P035 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
HACD3Q9P035 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HACD3Q9P035 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.51■□□□□ 0.23
HACD3Q9P035 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
HACD3Q9P035 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
HACD3Q9P035 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HACD3Q9P035 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HACD3Q9P035 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HACD3Q9P035 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.5■□□□□ 0.23
HACD3Q9P035 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HACD3Q9P035 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.5■□□□□ 0.23
HACD3Q9P035 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.5■□□□□ 0.23
HACD3Q9P035 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms