Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KRT18P38-201ENST00000449496 1282 ntBASIC15.85■□□□□ 0.13
NDE1Q9NXR1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 AC020658.6-201ENST00000623564 1870 ntBASIC15.84■□□□□ 0.13
NDE1Q9NXR1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 TSPY5P-201ENST00000426936 936 ntBASIC15.84■□□□□ 0.13
NDE1Q9NXR1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 AC020765.3-201ENST00000613051 740 ntBASIC15.84■□□□□ 0.13
NDE1Q9NXR1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 GRK6P1-201ENST00000400595 1711 ntBASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 AC139749.1-202ENST00000617529 3139 ntBASIC15.84■□□□□ 0.13
NDE1Q9NXR1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 TP73-AS1-210ENST00000637775 1455 ntBASIC15.84■□□□□ 0.13
NDE1Q9NXR1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NDE1Q9NXR1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.83■□□□□ 0.13
NDE1Q9NXR1 AC092919.2-201ENST00000623631 1645 ntBASIC15.83■□□□□ 0.13
NDE1Q9NXR1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NDE1Q9NXR1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 RNF152P1-201ENST00000397754 604 ntBASIC15.83■□□□□ 0.12
NDE1Q9NXR1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 AL645929.1-201ENST00000420084 975 ntBASIC15.83■□□□□ 0.12
NDE1Q9NXR1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 AC091167.2-201ENST00000579581 588 ntBASIC15.83■□□□□ 0.12
NDE1Q9NXR1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms