Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1R1Q9NWW0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1R1Q9NWW0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1R1Q9NWW0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1R1Q9NWW0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 RRP7BP-205ENST00000566851 833 ntBASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 AC008735.3-201ENST00000596646 500 ntBASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 AL033527.5-201ENST00000641382 801 ntBASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 AC005052.1-201ENST00000625181 2492 ntBASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 AL691432.1-201ENST00000596308 1422 ntBASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC1R1Q9NWW0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 AC007389.4-201ENST00000454674 793 ntBASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 CROCCP4-201ENST00000457096 498 ntBASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC1R1Q9NWW0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 Z97205.2-201ENST00000564697 1639 ntBASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.77■□□□□ 0.27
HCFC1R1Q9NWW0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.76■□□□□ 0.27
HCFC1R1Q9NWW0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms