Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PARPBPQ9NWS1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.07
PARPBPQ9NWS1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.65□□□□□ -0.07
PARPBPQ9NWS1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
PARPBPQ9NWS1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 SNHG9-202ENST00000564014 471 ntBASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 AC105339.1-204ENST00000636249 355 ntBASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PARPBPQ9NWS1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 ADH5P3-201ENST00000433842 1137 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AL592309.1-201ENST00000443127 649 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AP006288.1-201ENST00000446065 395 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC079140.1-201ENST00000508039 487 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC243562.1-201ENST00000560672 389 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC004835.2-201ENST00000603762 682 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 AC134684.3-201ENST00000641758 218 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 PCDHA14-201ENST00000506751 2298 ntBASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
PARPBPQ9NWS1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms