Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC005104.2-201ENST00000427818 678 ntBASIC19.39■□□□□ 0.69
RTN4Q9NQC3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 TMEM191A-211ENST00000637163 1067 ntBASIC19.39■□□□□ 0.69
RTN4Q9NQC3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 HTR3B-201ENST00000260191 2011 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 UBE2V2P4-201ENST00000447495 259 ntBASIC19.38■□□□□ 0.69
RTN4Q9NQC3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 AC034232.1-201ENST00000506026 1064 ntBASIC19.38■□□□□ 0.69
RTN4Q9NQC3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 AC004263.2-201ENST00000617183 678 ntBASIC19.38■□□□□ 0.69
RTN4Q9NQC3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 AC009154.2-201ENST00000621177 724 ntBASIC19.38■□□□□ 0.69
RTN4Q9NQC3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4Q9NQC3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 BX276092.7-203ENST00000637198 1536 ntBASIC19.37■□□□□ 0.69
RTN4Q9NQC3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 LINC01568-207ENST00000641790 1380 ntBASIC19.37■□□□□ 0.69
RTN4Q9NQC3 CICP23-201ENST00000605013 2741 ntBASIC19.37■□□□□ 0.69
RTN4Q9NQC3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 ARL4AP4-201ENST00000434170 518 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms