Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 EEF1DP4-201ENST00000446006 880 ntBASIC14.83□□□□□ -0.04
CHD8Q9HCK8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 AC026410.3-201ENST00000514280 936 ntBASIC14.83□□□□□ -0.04
CHD8Q9HCK8 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 AC138894.2-201ENST00000602838 371 ntBASIC14.83□□□□□ -0.04
CHD8Q9HCK8 FO393412.1-201ENST00000619841 382 ntBASIC14.83□□□□□ -0.04
CHD8Q9HCK8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 AC006453.1-201ENST00000636037 1257 ntBASIC14.82□□□□□ -0.04
CHD8Q9HCK8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 AC007881.3-201ENST00000608897 607 ntBASIC14.82□□□□□ -0.04
CHD8Q9HCK8 DRD5P1-201ENST00000456605 1438 ntBASIC14.82□□□□□ -0.04
CHD8Q9HCK8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHD8Q9HCK8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.81□□□□□ -0.04
CHD8Q9HCK8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 SCARNA21-201ENST00000517026 139 ntBASIC14.81□□□□□ -0.04
CHD8Q9HCK8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 AC093813.1-201ENST00000605066 256 ntBASIC14.81□□□□□ -0.04
CHD8Q9HCK8 AC022748.3-201ENST00000621828 275 ntBASIC14.81□□□□□ -0.04
CHD8Q9HCK8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 AC012362.1-201ENST00000434906 739 ntBASIC14.81□□□□□ -0.04
CHD8Q9HCK8 RNA5SP486-201ENST00000515961 83 ntBASIC14.81□□□□□ -0.04
CHD8Q9HCK8 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHD8Q9HCK8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 PDIA3P2-201ENST00000428073 158 ntBASIC14.8□□□□□ -0.04
CHD8Q9HCK8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms