Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 KRT8P26-201ENST00000534154 1276 ntBASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AC013467.2-201ENST00000605472 835 ntBASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AC006011.2-201ENST00000621313 1158 ntBASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AC148477.5-201ENST00000625164 1645 ntBASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PMPCAP1-201ENST00000508114 1576 ntBASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms