Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 PMS2P1-201ENST00000431037 1228 ntBASIC20.08■□□□□ 0.81
UPF2Q9HAU5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 AP003680.1-201ENST00000598970 3660 ntBASIC20.08■□□□□ 0.8
UPF2Q9HAU5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 SBF1P1-201ENST00000444527 5631 ntBASIC20.08■□□□□ 0.8
UPF2Q9HAU5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.08■□□□□ 0.8
UPF2Q9HAU5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 AC099063.4-201ENST00000641099 1602 ntBASIC20.07■□□□□ 0.8
UPF2Q9HAU5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 TMPOP1-202ENST00000424642 1267 ntBASIC20.07■□□□□ 0.8
UPF2Q9HAU5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 AP001269.4-201ENST00000609611 512 ntBASIC20.07■□□□□ 0.8
UPF2Q9HAU5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 PPT1-215ENST00000641471 2368 ntBASIC20.07■□□□□ 0.8
UPF2Q9HAU5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF2Q9HAU5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 AC139887.3-201ENST00000568585 713 ntBASIC20.06■□□□□ 0.8
UPF2Q9HAU5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 AL592424.1-201ENST00000563624 1536 ntBASIC20.06■□□□□ 0.8
UPF2Q9HAU5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF2Q9HAU5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms