Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 AC079781.4-201ENST00000641908 219 ntBASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AL513477.1-201ENST00000602865 2407 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AC016027.1-202ENST00000607927 1699 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AC006058.4-201ENST00000624016 1670 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 PMS2P2-201ENST00000425039 1128 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AC107918.2-201ENST00000530817 355 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 MIR4751-201ENST00000578027 74 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 MTDHP5-201ENST00000598980 586 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 AC129492.6-201ENST00000611383 1305 ntBASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXP3Q9BZS1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 DNAJB3-202ENST00000449667 1266 ntBASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXP3Q9BZS1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms