Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC009053.2-201ENST00000563701 2365 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 AC134915.1-201ENST00000426461 574 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 KRT18P64-201ENST00000434946 1219 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 BCRP2-202ENST00000447763 634 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 FO681548.1-201ENST00000455617 1132 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 BCRP6-201ENST00000510112 632 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 BCRP7-201ENST00000511549 544 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 AP001889.1-201ENST00000525414 633 ntBASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11XQ9BZA7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 RNA5SP412-201ENST00000516234 123 ntBASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 AL049840.4-201ENST00000602422 811 ntBASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 AP001094.4-201ENST00000579008 2176 ntBASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 AL133338.1-201ENST00000565695 1517 ntBASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH11XQ9BZA7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 RPL7P3-201ENST00000441388 714 ntBASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 CSF2RBP1-201ENST00000447905 391 ntBASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 AC120045.2-201ENST00000567334 178 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms