Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 MIR1233-2-201ENST00000408138 82 ntBASIC19.62■□□□□ 0.73
SALL3Q9BXA9 MIR1233-1-201ENST00000408722 82 ntBASIC19.62■□□□□ 0.73
SALL3Q9BXA9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 AL596442.2-201ENST00000610240 980 ntBASIC19.62■□□□□ 0.73
SALL3Q9BXA9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL3Q9BXA9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 AZGP1P1-201ENST00000411909 902 ntBASIC19.61■□□□□ 0.73
SALL3Q9BXA9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 MIR4453-201ENST00000584019 89 ntBASIC19.61■□□□□ 0.73
SALL3Q9BXA9 AP001160.2-201ENST00000596071 487 ntBASIC19.61■□□□□ 0.73
SALL3Q9BXA9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.61■□□□□ 0.73
SALL3Q9BXA9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL3Q9BXA9 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.6■□□□□ 0.73
SALL3Q9BXA9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL3Q9BXA9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms