Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 METTL21AP1-201ENST00000438852 635 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AC079140.1-201ENST00000508039 487 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AC027612.4-201ENST00000605371 583 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AC009093.7-201ENST00000623853 1223 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 LINC02228-204ENST00000642115 2962 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AC092053.1-201ENST00000605787 1936 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AC008741.2-201ENST00000612792 3115 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AL592309.1-201ENST00000443127 649 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 KRT8P48-201ENST00000515599 1220 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 IGHV3-62-201ENST00000520057 340 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AC243562.1-201ENST00000560672 389 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AC008267.7-201ENST00000624570 1194 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AC084121.4-201ENST00000641598 221 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 AF228730.8-201ENST00000642140 221 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 PP12613-201ENST00000424958 2230 ntBASIC11.41□□□□□ -0.58
UPK3BQ9BT76 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK3BQ9BT76 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms