Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN18Q99952 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTPN18Q99952 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTPN18Q99952 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTPN18Q99952 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTPN18Q99952 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
PTPN18Q99952 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 AC104306.2-201ENST00000451877 341 ntBASIC18.4■□□□□ 0.54
PTPN18Q99952 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PTPN18Q99952 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPN18Q99952 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN18Q99952 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 AC009053.2-201ENST00000563701 2365 ntBASIC18.4■□□□□ 0.54
PTPN18Q99952 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN18Q99952 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
PTPN18Q99952 LETM1P2-201ENST00000597330 2178 ntBASIC18.4■□□□□ 0.54
PTPN18Q99952 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN18Q99952 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PTPN18Q99952 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PTPN18Q99952 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN18Q99952 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.39■□□□□ 0.54
PTPN18Q99952 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN18Q99952 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN18Q99952 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.39■□□□□ 0.54
PTPN18Q99952 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN18Q99952 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTPN18Q99952 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN18Q99952 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN18Q99952 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN18Q99952 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN18Q99952 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN18Q99952 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PTPN18Q99952 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PTPN18Q99952 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN18Q99952 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN18Q99952 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN18Q99952 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PTPN18Q99952 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 REXO1L8P-201ENST00000604378 1897 ntBASIC18.38■□□□□ 0.53
PTPN18Q99952 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.38■□□□□ 0.53
PTPN18Q99952 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 ACTG1P17-201ENST00000558391 1119 ntBASIC18.38■□□□□ 0.53
PTPN18Q99952 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN18Q99952 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
PTPN18Q99952 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN18Q99952 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN18Q99952 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms