Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.85□□□□□ -0.67
LITAFQ99732 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 CRAT-202ENST00000393384 973 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
LITAFQ99732 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC10.85□□□□□ -0.67
LITAFQ99732 DHDH-203ENST00000522614 776 ntTSL 5 BASIC10.85□□□□□ -0.67
LITAFQ99732 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 AC091167.2-201ENST00000579581 588 ntBASIC10.85□□□□□ -0.67
LITAFQ99732 CYP2A7P1-201ENST00000595391 815 ntBASIC10.85□□□□□ -0.67
LITAFQ99732 AC140113.3-201ENST00000605663 199 ntBASIC10.85□□□□□ -0.67
LITAFQ99732 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LITAFQ99732 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 AC015656.1-201ENST00000624209 3578 ntBASIC10.85□□□□□ -0.67
LITAFQ99732 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.85□□□□□ -0.67
LITAFQ99732 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
LITAFQ99732 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LITAFQ99732 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.85□□□□□ -0.67
LITAFQ99732 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
LITAFQ99732 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.84□□□□□ -0.67
LITAFQ99732 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LITAFQ99732 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 SPDYE21P-201ENST00000413323 827 ntBASIC10.84□□□□□ -0.67
LITAFQ99732 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 AC098590.1-201ENST00000468126 897 ntBASIC10.84□□□□□ -0.67
LITAFQ99732 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC10.84□□□□□ -0.67
LITAFQ99732 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC10.84□□□□□ -0.67
LITAFQ99732 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms