Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD9AQ99638 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD9AQ99638 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAD9AQ99638 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD9AQ99638 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.24■□□□□ 0.35
RAD9AQ99638 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 AP001889.1-201ENST00000525414 633 ntBASIC17.24■□□□□ 0.35
RAD9AQ99638 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.24■□□□□ 0.35
RAD9AQ99638 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD9AQ99638 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD9AQ99638 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD9AQ99638 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.24■□□□□ 0.35
RAD9AQ99638 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.24■□□□□ 0.35
RAD9AQ99638 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 PCGF3-213ENST00000620529 1899 ntBASIC17.24■□□□□ 0.35
RAD9AQ99638 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD9AQ99638 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 AC090340.1-201ENST00000620778 4980 ntBASIC17.23■□□□□ 0.35
RAD9AQ99638 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RAD9AQ99638 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.23■□□□□ 0.35
RAD9AQ99638 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.23■□□□□ 0.35
RAD9AQ99638 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD9AQ99638 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.23■□□□□ 0.35
RAD9AQ99638 AC068587.3-201ENST00000526613 355 ntBASIC17.23■□□□□ 0.35
RAD9AQ99638 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.23■□□□□ 0.35
RAD9AQ99638 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD9AQ99638 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAD9AQ99638 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RAD9AQ99638 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD9AQ99638 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAD9AQ99638 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAD9AQ99638 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAD9AQ99638 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.23■□□□□ 0.35
RAD9AQ99638 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD9AQ99638 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAD9AQ99638 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RAD9AQ99638 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD9AQ99638 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAD9AQ99638 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD9AQ99638 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD9AQ99638 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 AC004987.2-201ENST00000395959 1148 ntBASIC17.22■□□□□ 0.35
RAD9AQ99638 AC134915.1-201ENST00000426461 574 ntBASIC17.22■□□□□ 0.35
RAD9AQ99638 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.22■□□□□ 0.35
RAD9AQ99638 AL355864.2-201ENST00000447420 863 ntBASIC17.22■□□□□ 0.35
RAD9AQ99638 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 AC007551.1-201ENST00000457394 519 ntBASIC17.22■□□□□ 0.35
RAD9AQ99638 AC099548.2-209ENST00000480264 625 ntBASIC17.22■□□□□ 0.35
RAD9AQ99638 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD9AQ99638 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.22■□□□□ 0.35
RAD9AQ99638 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD9AQ99638 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RAD9AQ99638 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RAD9AQ99638 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAD9AQ99638 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD9AQ99638 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD9AQ99638 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RAD9AQ99638 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD9AQ99638 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 LINC01144-201ENST00000626198 1710 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms