Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF2Q99496 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF2Q99496 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF2Q99496 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF2Q99496 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF2Q99496 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF2Q99496 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF2Q99496 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RNF2Q99496 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF2Q99496 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RNF2Q99496 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.06□□□□□ -0.32
RNF2Q99496 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF2Q99496 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RNF2Q99496 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.06□□□□□ -0.32
RNF2Q99496 RN7SL510P-201ENST00000581311 263 ntBASIC13.06□□□□□ -0.32
RNF2Q99496 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF2Q99496 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF2Q99496 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF2Q99496 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RNF2Q99496 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 NCF1C-201ENST00000438382 1427 ntBASIC13.05□□□□□ -0.32
RNF2Q99496 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
RNF2Q99496 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
RNF2Q99496 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 SBF1P1-201ENST00000444527 5631 ntBASIC13.05□□□□□ -0.32
RNF2Q99496 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RNF2Q99496 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.05□□□□□ -0.32
RNF2Q99496 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 AL691432.3-201ENST00000621860 400 ntBASIC13.05□□□□□ -0.32
RNF2Q99496 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF2Q99496 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF2Q99496 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.05□□□□□ -0.32
RNF2Q99496 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms