Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AL607033.1-201ENST00000623900 1599 ntBASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AC107373.2-201ENST00000607735 490 ntBASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AL121723.1-201ENST00000445194 1519 ntBASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AL442647.2-201ENST00000429864 857 ntBASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 MIR8072-201ENST00000614241 80 ntBASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 AC124067.4-201ENST00000519691 2379 ntBASIC18.86■□□□□ 0.61
CDK5RAP2Q96SN8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 AC112492.5-201ENST00000421897 457 ntBASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 AL162726.2-201ENST00000438986 1017 ntBASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 AL662844.4-201ENST00000606367 2838 ntBASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP2Q96SN8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 AC087499.6-201ENST00000411576 835 ntBASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 RN7SL399P-201ENST00000471648 279 ntBASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 AC015910.1-201ENST00000579400 975 ntBASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP2Q96SN8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms