Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 CYP2A7P1-201ENST00000595391 815 ntBASIC13.28□□□□□ -0.28
RAB40CQ96S21 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 AP001350.2-201ENST00000625104 1094 ntBASIC13.28□□□□□ -0.28
RAB40CQ96S21 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 NCF1C-201ENST00000438382 1427 ntBASIC13.28□□□□□ -0.28
RAB40CQ96S21 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RAB40CQ96S21 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.27□□□□□ -0.28
RAB40CQ96S21 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB40CQ96S21 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
RAB40CQ96S21 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.27□□□□□ -0.28
RAB40CQ96S21 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB40CQ96S21 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB40CQ96S21 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RAB40CQ96S21 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB40CQ96S21 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.27□□□□□ -0.28
RAB40CQ96S21 SBF1P1-201ENST00000444527 5631 ntBASIC13.27□□□□□ -0.28
RAB40CQ96S21 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB40CQ96S21 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
RAB40CQ96S21 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB40CQ96S21 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AL358472.4-201ENST00000633140 710 ntBASIC13.27□□□□□ -0.29
RAB40CQ96S21 AP000550.4-202ENST00000639755 178 ntBASIC13.27□□□□□ -0.29
RAB40CQ96S21 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAB40CQ96S21 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB40CQ96S21 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms