Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 MIR658-201ENST00000385210 100 ntBASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 MEP1AP4-201ENST00000423244 1087 ntBASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 WASH4P-201ENST00000564273 1246 ntBASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 AC055876.2-201ENST00000531834 546 ntBASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC46A1Q96NT5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 PCDHA12-202ENST00000613593 2588 ntBASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC46A1Q96NT5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 AC022210.1-201ENST00000449856 793 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms