Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 AC026748.1-201ENST00000624349 3251 ntBASIC14.05□□□□□ -0.16
CMTM3Q96MX0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 RCN1P2-201ENST00000398357 915 ntBASIC14.05□□□□□ -0.16
CMTM3Q96MX0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 AC113347.1-201ENST00000413321 391 ntBASIC14.05□□□□□ -0.16
CMTM3Q96MX0 AL137013.1-201ENST00000432946 1228 ntBASIC14.05□□□□□ -0.16
CMTM3Q96MX0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMTM3Q96MX0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 AC112693.3-201ENST00000624819 1983 ntBASIC14.04□□□□□ -0.16
CMTM3Q96MX0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 POM121L3P-201ENST00000419331 1163 ntBASIC14.04□□□□□ -0.16
CMTM3Q96MX0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 AC005412.3-201ENST00000580309 715 ntBASIC14.04□□□□□ -0.16
CMTM3Q96MX0 AL139424.1-201ENST00000607572 797 ntBASIC14.04□□□□□ -0.16
CMTM3Q96MX0 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 AC005363.2-201ENST00000618631 242 ntBASIC14.04□□□□□ -0.16
CMTM3Q96MX0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms