Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CICP23-201ENST00000605013 2741 ntBASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 VENTXP7-201ENST00000475503 772 ntBASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 AL121672.3-201ENST00000608644 468 ntBASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 AD001527.2-201ENST00000622994 785 ntBASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 AC087481.3-201ENST00000602886 1894 ntBASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP6Q96FZ7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 AC005332.1-201ENST00000577698 1310 ntBASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 AC073592.5-201ENST00000624854 528 ntBASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms