Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 AC064862.7-201ENST00000604520 867 ntBASIC14.52□□□□□ -0.09
RFT1Q96AA3 AL445228.2-201ENST00000605589 952 ntBASIC14.52□□□□□ -0.09
RFT1Q96AA3 AC091076.1-201ENST00000610741 619 ntBASIC14.52□□□□□ -0.09
RFT1Q96AA3 AC010331.1-201ENST00000611423 582 ntBASIC14.52□□□□□ -0.09
RFT1Q96AA3 AC073592.4-201ENST00000623827 446 ntBASIC14.52□□□□□ -0.09
RFT1Q96AA3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 AL590787.1-201ENST00000568856 1315 ntBASIC14.51□□□□□ -0.09
RFT1Q96AA3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 AP002414.1-201ENST00000391405 1147 ntBASIC14.51□□□□□ -0.09
RFT1Q96AA3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 PRAL-201ENST00000624952 3286 ntBASIC14.51□□□□□ -0.09
RFT1Q96AA3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFT1Q96AA3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.51□□□□□ -0.09
RFT1Q96AA3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 OR2I1P-210ENST00000642037 4691 ntBASIC14.5□□□□□ -0.09
RFT1Q96AA3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 KRT16P4-201ENST00000453883 522 ntBASIC14.5□□□□□ -0.09
RFT1Q96AA3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms