Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.98□□□□□ -0.17
USP9XQ93008 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
USP9XQ93008 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.98□□□□□ -0.17
USP9XQ93008 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
USP9XQ93008 RPL13AP19-201ENST00000434320 584 ntBASIC13.98□□□□□ -0.17
USP9XQ93008 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 AC013467.2-201ENST00000605472 835 ntBASIC13.98□□□□□ -0.17
USP9XQ93008 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 AC092053.1-201ENST00000605787 1936 ntBASIC13.98□□□□□ -0.17
USP9XQ93008 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 AL512652.2-201ENST00000625156 1716 ntBASIC13.98□□□□□ -0.17
USP9XQ93008 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.98□□□□□ -0.17
USP9XQ93008 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 AHCYP2-201ENST00000430630 1300 ntBASIC13.97□□□□□ -0.17
USP9XQ93008 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
USP9XQ93008 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
USP9XQ93008 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 SPTLC1P5-201ENST00000450718 252 ntBASIC13.97□□□□□ -0.17
USP9XQ93008 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
USP9XQ93008 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.97□□□□□ -0.17
USP9XQ93008 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 MIR1202-201ENST00000408529 83 ntBASIC13.97□□□□□ -0.17
USP9XQ93008 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.97□□□□□ -0.17
USP9XQ93008 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 FGFR3P5-201ENST00000564496 886 ntBASIC13.97□□□□□ -0.17
USP9XQ93008 AC025279.2-201ENST00000569730 653 ntBASIC13.97□□□□□ -0.17
USP9XQ93008 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.97□□□□□ -0.17
USP9XQ93008 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
USP9XQ93008 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
USP9XQ93008 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USP9XQ93008 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.96□□□□□ -0.17
USP9XQ93008 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.96□□□□□ -0.17
USP9XQ93008 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
USP9XQ93008 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.96□□□□□ -0.17
USP9XQ93008 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.96□□□□□ -0.17
USP9XQ93008 AZGP1P1-201ENST00000411909 902 ntBASIC13.96□□□□□ -0.17
USP9XQ93008 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.96□□□□□ -0.17
USP9XQ93008 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.96□□□□□ -0.17
USP9XQ93008 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.96□□□□□ -0.17
USP9XQ93008 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.96□□□□□ -0.17
USP9XQ93008 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USP9XQ93008 TNXA-203ENST00000507684 2038 ntBASIC13.96□□□□□ -0.17
USP9XQ93008 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms