Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 EEF1DP4-201ENST00000446006 880 ntBASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 AC092658.1-201ENST00000505836 891 ntBASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 AC243562.2-201ENST00000561247 970 ntBASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 RPSAP52-203ENST00000622976 1023 ntBASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 AL033527.4-201ENST00000641026 673 ntBASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 AL645608.8-201ENST00000606034 2086 ntBASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 KRT8P37-201ENST00000451609 1420 ntBASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 KRT43P-201ENST00000434019 910 ntBASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 RPL13P2-201ENST00000440687 659 ntBASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 USP32P1-208ENST00000506594 1164 ntBASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 AC104989.1-201ENST00000519711 778 ntBASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAPGEF4Q8WZA2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF4Q8WZA2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
RAPGEF4Q8WZA2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF4Q8WZA2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF4Q8WZA2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF4Q8WZA2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.14■□□□□ 0.98
RAPGEF4Q8WZA2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 AC245100.5-201ENST00000452108 331 ntBASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF4Q8WZA2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms