Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 AC073648.2-201ENST00000510116 352 ntBASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 AC105339.3-201ENST00000560043 636 ntBASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 LINC01711-201ENST00000598340 967 ntBASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 AC004790.2-201ENST00000623588 572 ntBASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 AC006486.2-201ENST00000624246 2199 ntBASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 RNPS1P1-201ENST00000507437 918 ntBASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 AL121894.2-201ENST00000602977 491 ntBASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 AP002414.3-201ENST00000589352 1468 ntBASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC44A1Q8WWI5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
SLC44A1Q8WWI5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
SLC44A1Q8WWI5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SLC44A1Q8WWI5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC44A1Q8WWI5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC44A1Q8WWI5 AC011477.6-201ENST00000604980 1927 ntBASIC16.33■□□□□ 0.21
SLC44A1Q8WWI5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC44A1Q8WWI5 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 AC005593.1-201ENST00000624894 515 ntBASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms