Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL596087.1-201ENST00000400979 1969 ntBASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 AZGP1P1-201ENST00000411909 902 ntBASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 AC084121.4-201ENST00000641598 221 ntBASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 AF228730.8-201ENST00000642140 221 ntBASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM3Q8TF72 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AL136982.4-201ENST00000437689 1740 ntBASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 MIR6080-201ENST00000617359 66 ntBASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 PAUPAR-201ENST00000630360 2965 ntBASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 HLA-H-201ENST00000383620 1096 ntBASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 LINC01225-203ENST00000563550 1244 ntBASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SHROOM3Q8TF72 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 AC022188.1-201ENST00000620960 1664 ntBASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 AL008721.1-201ENST00000609964 604 ntBASIC16.54■□□□□ 0.24
SHROOM3Q8TF72 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms