Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 AC010328.2-201ENST00000597698 1111 ntBASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 AL021578.1-201ENST00000613646 709 ntBASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SH3TC2Q8TF17 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 AC084018.2-201ENST00000613093 2607 ntBASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 RPL13AP20-201ENST00000459725 609 ntBASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 AC133539.2-201ENST00000604757 467 ntBASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3TC2Q8TF17 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.33■□□□□ 0.53
SH3TC2Q8TF17 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 AC093724.1-201ENST00000448659 1027 ntBASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 AL645608.8-201ENST00000606034 2086 ntBASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3TC2Q8TF17 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3TC2Q8TF17 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms