Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 AC139530.3-201ENST00000620344 690 ntBASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 AC009093.7-201ENST00000623853 1223 ntBASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CCDC148Q8NFR7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 FAM220BP-201ENST00000377689 816 ntBASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 HLA-H-201ENST00000383620 1096 ntBASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 AC093520.2-201ENST00000561830 333 ntBASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 AC024267.1-201ENST00000582320 895 ntBASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 AL596442.2-201ENST00000610240 980 ntBASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 AC011270.2-201ENST00000624293 2550 ntBASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC148Q8NFR7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 RPS8P6-201ENST00000426177 609 ntBASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms