Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LPCAT1Q8NF37 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LPCAT1Q8NF37 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
LPCAT1Q8NF37 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LPCAT1Q8NF37 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LPCAT1Q8NF37 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.46■□□□□ 0.23
LPCAT1Q8NF37 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.46■□□□□ 0.22
LPCAT1Q8NF37 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
LPCAT1Q8NF37 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
LPCAT1Q8NF37 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 FAM58DP-201ENST00000428076 619 ntBASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 AC023141.5-201ENST00000458585 616 ntBASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 AC098859.1-201ENST00000502915 1238 ntBASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LPCAT1Q8NF37 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CYP2T1P-202ENST00000641596 2535 ntBASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 AC027612.4-201ENST00000605371 583 ntBASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 AC006538.3-201ENST00000612495 578 ntBASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LPCAT1Q8NF37 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms