Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 MIR1908-201ENST00000410394 80 ntBASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 AL158212.4-201ENST00000624062 1286 ntBASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 AC006538.1-201ENST00000567905 1585 ntBASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 U82695.1-201ENST00000635752 1889 ntBASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 PDIA3P1-201ENST00000471856 1510 ntBASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 AL133338.1-201ENST00000565695 1517 ntBASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 FAM8A2P-201ENST00000528813 1142 ntBASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 AC036164.1-201ENST00000570544 333 ntBASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 BTNL10-201ENST00000595971 695 ntBASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 AC233724.13-201ENST00000598383 410 ntBASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 AC093525.8-201ENST00000624099 1342 ntBASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 ACTBP11-201ENST00000436287 1126 ntBASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 LINC01115-203ENST00000606068 577 ntBASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CARMIL3Q8ND23 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.2■□□□□ 0.83
CARMIL3Q8ND23 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 AL442647.2-201ENST00000429864 857 ntBASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 AL162726.2-201ENST00000438986 1017 ntBASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 MIR5189-201ENST00000577370 114 ntBASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.2■□□□□ 0.82
CARMIL3Q8ND23 MIR6787-201ENST00000616675 61 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms