Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 CROCCP4-201ENST00000457096 498 ntBASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 RPSAP52-203ENST00000622976 1023 ntBASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 AL592424.1-201ENST00000563624 1536 ntBASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AC078925.2-201ENST00000624013 1973 ntBASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AL162726.2-201ENST00000438986 1017 ntBASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AC092658.1-201ENST00000505836 891 ntBASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 USP32P1-208ENST00000506594 1164 ntBASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AC104989.1-201ENST00000519711 778 ntBASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AL033527.4-201ENST00000641026 673 ntBASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NPAS4Q8IUM7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms