Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
LDB1Q86U70 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB1Q86U70 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
LDB1Q86U70 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LDB1Q86U70 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB1Q86U70 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
LDB1Q86U70 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.29■□□□□ 0.2
LDB1Q86U70 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LDB1Q86U70 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.29■□□□□ 0.2
LDB1Q86U70 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB1Q86U70 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LDB1Q86U70 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
LDB1Q86U70 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LDB1Q86U70 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.28■□□□□ 0.2
LDB1Q86U70 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.28■□□□□ 0.2
LDB1Q86U70 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.28■□□□□ 0.2
LDB1Q86U70 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.28■□□□□ 0.2
LDB1Q86U70 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LDB1Q86U70 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDB1Q86U70 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.28■□□□□ 0.2
LDB1Q86U70 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB1Q86U70 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LDB1Q86U70 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
LDB1Q86U70 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.27■□□□□ 0.2
LDB1Q86U70 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LDB1Q86U70 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LDB1Q86U70 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.27■□□□□ 0.2
LDB1Q86U70 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.27■□□□□ 0.2
LDB1Q86U70 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.27■□□□□ 0.2
LDB1Q86U70 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.27■□□□□ 0.2
LDB1Q86U70 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 PRYP6-201ENST00000514804 343 ntBASIC16.27■□□□□ 0.2
LDB1Q86U70 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.27■□□□□ 0.2
LDB1Q86U70 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.27■□□□□ 0.2
LDB1Q86U70 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.27■□□□□ 0.2
LDB1Q86U70 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.27■□□□□ 0.2
LDB1Q86U70 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.27■□□□□ 0.2
LDB1Q86U70 RARRES2P8-201ENST00000566335 367 ntBASIC16.27■□□□□ 0.2
LDB1Q86U70 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.27■□□□□ 0.2
LDB1Q86U70 AC002347.1-201ENST00000569543 541 ntBASIC16.27■□□□□ 0.2
LDB1Q86U70 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.27■□□□□ 0.2
LDB1Q86U70 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
LDB1Q86U70 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDB1Q86U70 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LDB1Q86U70 CDC14C-201ENST00000428251 1719 ntBASIC16.27■□□□□ 0.19
LDB1Q86U70 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LDB1Q86U70 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LDB1Q86U70 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.27■□□□□ 0.19
LDB1Q86U70 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LDB1Q86U70 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms