Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 AC012569.1-201ENST00000591191 1524 ntBASIC16.06■□□□□ 0.16
SYVN1Q86TM6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 AC004835.2-201ENST00000603762 682 ntBASIC16.06■□□□□ 0.16
SYVN1Q86TM6 ACTL9-202ENST00000612068 1252 ntBASIC16.06■□□□□ 0.16
SYVN1Q86TM6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 AL596257.1-201ENST00000641463 2694 ntBASIC16.06■□□□□ 0.16
SYVN1Q86TM6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AC112191.1-201ENST00000523689 701 ntBASIC16.05■□□□□ 0.16
SYVN1Q86TM6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AC027612.4-201ENST00000605371 583 ntBASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AC020765.3-201ENST00000613051 740 ntBASIC16.05■□□□□ 0.16
SYVN1Q86TM6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AC092902.6-201ENST00000641783 218 ntBASIC16.05■□□□□ 0.16
SYVN1Q86TM6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AL513477.1-201ENST00000602865 2407 ntBASIC16.05■□□□□ 0.16
SYVN1Q86TM6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYVN1Q86TM6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 TSEN15P1-201ENST00000423257 515 ntBASIC16.04■□□□□ 0.16
SYVN1Q86TM6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 AL513210.1-201ENST00000629608 234 ntBASIC16.04■□□□□ 0.16
SYVN1Q86TM6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms