Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 LINC02447-202ENST00000501888 2146 ntBASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 RBPMS2P1-201ENST00000437762 623 ntBASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 AC027612.4-201ENST00000605371 583 ntBASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 AL691403.2-201ENST00000618460 490 ntBASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE4Q2TBC4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AL365203.3-201ENST00000609742 2057 ntBASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AC010491.1-201ENST00000563101 2797 ntBASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 RPS8P6-201ENST00000426177 609 ntBASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AC112504.1-201ENST00000623415 1841 ntBASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms