Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.1■□□□□ 0.97
CCDC27Q2M243 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 RN7SL828P-201ENST00000607615 303 ntBASIC21.1■□□□□ 0.97
CCDC27Q2M243 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 MIR6080-201ENST00000617359 66 ntBASIC21.1■□□□□ 0.97
CCDC27Q2M243 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC27Q2M243 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC27Q2M243 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 AC025678.2-201ENST00000562061 970 ntBASIC21.09■□□□□ 0.97
CCDC27Q2M243 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 Z92544.3-201ENST00000624747 417 ntBASIC21.09■□□□□ 0.97
CCDC27Q2M243 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC27Q2M243 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC27Q2M243 AC010491.1-201ENST00000563101 2797 ntBASIC21.08■□□□□ 0.97
CCDC27Q2M243 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 AC079328.2-201ENST00000561241 3354 ntBASIC21.08■□□□□ 0.97
CCDC27Q2M243 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 KRT18P28-201ENST00000453838 1332 ntBASIC21.08■□□□□ 0.97
CCDC27Q2M243 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 AC003101.2-201ENST00000612557 442 ntBASIC21.08■□□□□ 0.97
CCDC27Q2M243 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC27Q2M243 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC27Q2M243 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC27Q2M243 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC27Q2M243 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC27Q2M243 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CCDC27Q2M243 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC27Q2M243 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 CNN2P2-201ENST00000443536 909 ntBASIC21.07■□□□□ 0.96
CCDC27Q2M243 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 CNN2P3-201ENST00000450201 906 ntBASIC21.07■□□□□ 0.96
CCDC27Q2M243 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.07■□□□□ 0.96
CCDC27Q2M243 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms