Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
SEC61A1P61619 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC61A1P61619 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SEC61A1P61619 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.36□□□□□ -0.11
SEC61A1P61619 AC022532.1-201ENST00000624563 1728 ntBASIC14.36□□□□□ -0.11
SEC61A1P61619 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SEC61A1P61619 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.36□□□□□ -0.11
SEC61A1P61619 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 PTCHD3P3-201ENST00000403073 906 ntBASIC14.36□□□□□ -0.11
SEC61A1P61619 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
SEC61A1P61619 AC108073.2-201ENST00000464002 357 ntBASIC14.36□□□□□ -0.11
SEC61A1P61619 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SEC61A1P61619 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.36□□□□□ -0.11
SEC61A1P61619 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.36□□□□□ -0.11
SEC61A1P61619 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SEC61A1P61619 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC61A1P61619 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 PMS2P7-201ENST00000506558 1336 ntBASIC14.36□□□□□ -0.11
SEC61A1P61619 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.36□□□□□ -0.11
SEC61A1P61619 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.36□□□□□ -0.11
SEC61A1P61619 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SEC61A1P61619 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC61A1P61619 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC61A1P61619 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC61A1P61619 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.36□□□□□ -0.11
SEC61A1P61619 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SEC61A1P61619 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SEC61A1P61619 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.35□□□□□ -0.11
SEC61A1P61619 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.35□□□□□ -0.11
SEC61A1P61619 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 KRT18P3-201ENST00000451602 1288 ntBASIC14.35□□□□□ -0.11
SEC61A1P61619 PGAM5P1-201ENST00000518923 814 ntBASIC14.35□□□□□ -0.11
SEC61A1P61619 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 MIR4751-201ENST00000578027 74 ntBASIC14.35□□□□□ -0.11
SEC61A1P61619 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SEC61A1P61619 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
SEC61A1P61619 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.35□□□□□ -0.11
SEC61A1P61619 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC61A1P61619 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61A1P61619 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.34□□□□□ -0.11
SEC61A1P61619 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms