Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
CKS1BP61024 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.52□□□□□ -0.56
CKS1BP61024 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.52□□□□□ -0.56
CKS1BP61024 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.52□□□□□ -0.56
CKS1BP61024 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.56
CKS1BP61024 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.52□□□□□ -0.56
CKS1BP61024 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS1BP61024 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS1BP61024 TSPY15P-201ENST00000457163 923 ntBASIC11.52□□□□□ -0.57
CKS1BP61024 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 AP002490.2-201ENST00000524791 560 ntBASIC11.52□□□□□ -0.57
CKS1BP61024 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.52□□□□□ -0.57
CKS1BP61024 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS1BP61024 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CKS1BP61024 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 AC011700.1-201ENST00000610409 2627 ntBASIC11.52□□□□□ -0.57
CKS1BP61024 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS1BP61024 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS1BP61024 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS1BP61024 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS1BP61024 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CKS1BP61024 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS1BP61024 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.51□□□□□ -0.57
CKS1BP61024 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CKS1BP61024 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.51□□□□□ -0.57
CKS1BP61024 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.51□□□□□ -0.57
CKS1BP61024 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms