Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH12P55289 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH12P55289 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.25■□□□□ 0.03
CDH12P55289 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDH12P55289 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH12P55289 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH12P55289 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH12P55289 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDH12P55289 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH12P55289 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH12P55289 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH12P55289 AP003680.1-201ENST00000598970 3660 ntBASIC15.24■□□□□ 0.03
CDH12P55289 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
CDH12P55289 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH12P55289 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH12P55289 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.24■□□□□ 0.03
CDH12P55289 AC018712.1-201ENST00000455767 687 ntBASIC15.24■□□□□ 0.03
CDH12P55289 IGHV3-65-201ENST00000523210 341 ntBASIC15.24■□□□□ 0.03
CDH12P55289 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH12P55289 AC087641.1-201ENST00000557561 1021 ntBASIC15.24■□□□□ 0.03
CDH12P55289 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.24■□□□□ 0.03
CDH12P55289 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH12P55289 AC105339.3-201ENST00000560043 636 ntBASIC15.24■□□□□ 0.03
CDH12P55289 AC012640.2-201ENST00000561606 901 ntBASIC15.24■□□□□ 0.03
CDH12P55289 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH12P55289 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH12P55289 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH12P55289 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH12P55289 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CDH12P55289 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH12P55289 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH12P55289 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CDH12P55289 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH12P55289 AC069224.1-201ENST00000566372 1715 ntBASIC15.23■□□□□ 0.03
CDH12P55289 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH12P55289 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH12P55289 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH12P55289 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH12P55289 AP002414.3-201ENST00000589352 1468 ntBASIC15.23■□□□□ 0.03
CDH12P55289 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDH12P55289 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH12P55289 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CDH12P55289 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH12P55289 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH12P55289 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CDH12P55289 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH12P55289 AF186996.4-201ENST00000467186 377 ntBASIC15.23■□□□□ 0.03
CDH12P55289 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH12P55289 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH12P55289 AC005412.3-201ENST00000580309 715 ntBASIC15.23■□□□□ 0.03
CDH12P55289 AP001350.2-201ENST00000625104 1094 ntBASIC15.23■□□□□ 0.03
CDH12P55289 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH12P55289 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH12P55289 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms