Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 GAPDHP21-201ENST00000450301 1010 ntBASIC16.74■□□□□ 0.27
ATXN3P54252 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.74■□□□□ 0.27
ATXN3P54252 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.74■□□□□ 0.27
ATXN3P54252 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.74■□□□□ 0.27
ATXN3P54252 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ATXN3P54252 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 AC116353.5-201ENST00000638148 1699 ntBASIC16.74■□□□□ 0.27
ATXN3P54252 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.73■□□□□ 0.27
ATXN3P54252 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.73■□□□□ 0.27
ATXN3P54252 AC092053.1-201ENST00000605787 1936 ntBASIC16.73■□□□□ 0.27
ATXN3P54252 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.73■□□□□ 0.27
ATXN3P54252 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.73■□□□□ 0.27
ATXN3P54252 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.73■□□□□ 0.27
ATXN3P54252 SPCS2P4-201ENST00000436160 681 ntBASIC16.73■□□□□ 0.27
ATXN3P54252 AC069120.2-201ENST00000524091 540 ntBASIC16.73■□□□□ 0.27
ATXN3P54252 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.73■□□□□ 0.27
ATXN3P54252 KRT8P23-201ENST00000560090 1207 ntBASIC16.73■□□□□ 0.27
ATXN3P54252 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 MIR6080-201ENST00000617359 66 ntBASIC16.73■□□□□ 0.27
ATXN3P54252 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.73■□□□□ 0.27
ATXN3P54252 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATXN3P54252 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ATXN3P54252 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
ATXN3P54252 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.72■□□□□ 0.27
ATXN3P54252 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.72■□□□□ 0.27
ATXN3P54252 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms