Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 KRT18P2-201ENST00000447938 1258 ntBASIC15.84■□□□□ 0.13
CLCN2P51788 AC096734.2-201ENST00000562054 433 ntBASIC15.84■□□□□ 0.13
CLCN2P51788 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 AC129492.6-201ENST00000611383 1305 ntBASIC15.84■□□□□ 0.13
CLCN2P51788 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.83■□□□□ 0.13
CLCN2P51788 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN2P51788 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN2P51788 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN2P51788 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN2P51788 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.83■□□□□ 0.13
CLCN2P51788 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.83■□□□□ 0.13
CLCN2P51788 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCN2P51788 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCN2P51788 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN2P51788 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCN2P51788 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLCN2P51788 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 BX842568.4-201ENST00000421222 227 ntBASIC15.83■□□□□ 0.12
CLCN2P51788 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN2P51788 CXCL1P1-201ENST00000502804 216 ntBASIC15.83■□□□□ 0.12
CLCN2P51788 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN2P51788 AC092865.5-201ENST00000545435 363 ntBASIC15.83■□□□□ 0.12
CLCN2P51788 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN2P51788 AC002347.1-201ENST00000569543 541 ntBASIC15.83■□□□□ 0.12
CLCN2P51788 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 AC007064.4-201ENST00000637740 555 ntBASIC15.83■□□□□ 0.12
CLCN2P51788 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN2P51788 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN2P51788 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLCN2P51788 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLCN2P51788 AC002310.6-201ENST00000624451 1377 ntBASIC15.83■□□□□ 0.12
CLCN2P51788 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN2P51788 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CLCN2P51788 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN2P51788 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
CLCN2P51788 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN2P51788 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN2P51788 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN2P51788 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN2P51788 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN2P51788 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN2P51788 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN2P51788 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCN2P51788 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCN2P51788 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN2P51788 KRT18P13-201ENST00000400056 1290 ntBASIC15.82■□□□□ 0.12
CLCN2P51788 IGLL3P-201ENST00000412472 434 ntBASIC15.82■□□□□ 0.12
CLCN2P51788 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN2P51788 SLC25A6P2-201ENST00000497974 877 ntBASIC15.82■□□□□ 0.12
CLCN2P51788 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLCN2P51788 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN2P51788 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms