Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC10.96□□□□□ -0.65
PCP4P48539 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC10.96□□□□□ -0.65
PCP4P48539 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.96□□□□□ -0.65
PCP4P48539 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PCP4P48539 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC10.96□□□□□ -0.66
PCP4P48539 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
PCP4P48539 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
PCP4P48539 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
PCP4P48539 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
PCP4P48539 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.95□□□□□ -0.66
PCP4P48539 AC004494.1-201ENST00000613210 2775 ntBASIC10.95□□□□□ -0.66
PCP4P48539 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 KRT8P9-201ENST00000558927 1449 ntBASIC10.95□□□□□ -0.66
PCP4P48539 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 AC097381.1-201ENST00000429019 1296 ntBASIC10.95□□□□□ -0.66
PCP4P48539 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
PCP4P48539 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 DACH2-202ENST00000373131 2418 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
PCP4P48539 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
PCP4P48539 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 AC018512.1-201ENST00000417761 2326 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PCP4P48539 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC10.95□□□□□ -0.66
PCP4P48539 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.95□□□□□ -0.66
PCP4P48539 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC10.94□□□□□ -0.66
PCP4P48539 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 MAP2K6-206ENST00000590474 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
PCP4P48539 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
PCP4P48539 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms