Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL596087.1-201ENST00000400979 1969 ntBASIC17.57■□□□□ 0.4
TNFSF9P41273 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TNFSF9P41273 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TNFSF9P41273 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.57■□□□□ 0.4
TNFSF9P41273 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFSF9P41273 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.57■□□□□ 0.4
TNFSF9P41273 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFSF9P41273 AC027369.6-201ENST00000525520 931 ntBASIC17.57■□□□□ 0.4
TNFSF9P41273 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.57■□□□□ 0.4
TNFSF9P41273 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TNFSF9P41273 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.57■□□□□ 0.4
TNFSF9P41273 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFSF9P41273 AL589739.1-201ENST00000607720 493 ntBASIC17.57■□□□□ 0.4
TNFSF9P41273 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFSF9P41273 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TNFSF9P41273 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFSF9P41273 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TNFSF9P41273 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF9P41273 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TNFSF9P41273 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TNFSF9P41273 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TNFSF9P41273 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TNFSF9P41273 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TNFSF9P41273 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFSF9P41273 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.56■□□□□ 0.4
TNFSF9P41273 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.56■□□□□ 0.4
TNFSF9P41273 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.56■□□□□ 0.4
TNFSF9P41273 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.56■□□□□ 0.4
TNFSF9P41273 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.56■□□□□ 0.4
TNFSF9P41273 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF9P41273 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TNFSF9P41273 LINC02199-201ENST00000506655 2702 ntBASIC17.56■□□□□ 0.4
TNFSF9P41273 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.56■□□□□ 0.4
TNFSF9P41273 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFSF9P41273 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF9P41273 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TNFSF9P41273 OR6D1P-203ENST00000641209 4860 ntBASIC17.55■□□□□ 0.4
TNFSF9P41273 CETN4P-206ENST00000642099 2168 ntBASIC17.55■□□□□ 0.4
TNFSF9P41273 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF9P41273 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF9P41273 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TNFSF9P41273 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF9P41273 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.55■□□□□ 0.4
TNFSF9P41273 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF9P41273 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TNFSF9P41273 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF9P41273 AL079307.3-201ENST00000556114 283 ntBASIC17.55■□□□□ 0.4
TNFSF9P41273 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.55■□□□□ 0.4
TNFSF9P41273 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.55■□□□□ 0.4
TNFSF9P41273 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF9P41273 AC124067.4-201ENST00000519691 2379 ntBASIC17.55■□□□□ 0.4
TNFSF9P41273 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TNFSF9P41273 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF9P41273 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TNFSF9P41273 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 AC100757.3-201ENST00000622361 1406 ntBASIC17.55■□□□□ 0.4
TNFSF9P41273 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF9P41273 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.55■□□□□ 0.4
TNFSF9P41273 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF9P41273 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF9P41273 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms