Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V1AP38606 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V1AP38606 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATP6V1AP38606 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V1AP38606 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V1AP38606 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP6V1AP38606 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 AC074338.1-201ENST00000416825 156 ntBASIC20.55■□□□□ 0.88
ATP6V1AP38606 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 RNA5SP412-201ENST00000516234 123 ntBASIC20.55■□□□□ 0.88
ATP6V1AP38606 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V1AP38606 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ATP6V1AP38606 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 AC020916.1-201ENST00000587762 1774 ntBASIC20.54■□□□□ 0.88
ATP6V1AP38606 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 AL133373.2-201ENST00000623187 2828 ntBASIC20.54■□□□□ 0.88
ATP6V1AP38606 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 GGT3P-204ENST00000453783 1664 ntBASIC20.54■□□□□ 0.88
ATP6V1AP38606 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP6V1AP38606 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V1AP38606 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 BCYRN1-201ENST00000418539 200 ntBASIC20.53■□□□□ 0.88
ATP6V1AP38606 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 RPL7P3-201ENST00000441388 714 ntBASIC20.53■□□□□ 0.88
ATP6V1AP38606 FO681548.1-201ENST00000455617 1132 ntBASIC20.53■□□□□ 0.88
ATP6V1AP38606 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V1AP38606 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
ATP6V1AP38606 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms