Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDE6BP35913 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE6BP35913 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE6BP35913 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDE6BP35913 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDE6BP35913 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
PDE6BP35913 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE6BP35913 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 KRT8P37-201ENST00000451609 1420 ntBASIC19.87■□□□□ 0.77
PDE6BP35913 INTS4P2-202ENST00000614726 2019 ntBASIC19.87■□□□□ 0.77
PDE6BP35913 AC007613.1-201ENST00000572811 2597 ntBASIC19.87■□□□□ 0.77
PDE6BP35913 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE6BP35913 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
PDE6BP35913 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
PDE6BP35913 AC079316.1-201ENST00000548397 411 ntBASIC19.87■□□□□ 0.77
PDE6BP35913 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE6BP35913 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.87■□□□□ 0.77
PDE6BP35913 AC009486.1-201ENST00000569860 813 ntBASIC19.87■□□□□ 0.77
PDE6BP35913 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PDE6BP35913 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.87■□□□□ 0.77
PDE6BP35913 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.87■□□□□ 0.77
PDE6BP35913 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.87■□□□□ 0.77
PDE6BP35913 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
PDE6BP35913 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.87■□□□□ 0.77
PDE6BP35913 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6BP35913 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE6BP35913 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
PDE6BP35913 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.86■□□□□ 0.77
PDE6BP35913 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 YBX1P6-201ENST00000442962 1002 ntBASIC19.86■□□□□ 0.77
PDE6BP35913 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PDE6BP35913 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.86■□□□□ 0.77
PDE6BP35913 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PDE6BP35913 AC243562.2-201ENST00000561247 970 ntBASIC19.86■□□□□ 0.77
PDE6BP35913 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.86■□□□□ 0.77
PDE6BP35913 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE6BP35913 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PDE6BP35913 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6BP35913 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PDE6BP35913 AL603756.1-201ENST00000606511 2163 ntBASIC19.85■□□□□ 0.77
PDE6BP35913 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PDE6BP35913 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.85■□□□□ 0.77
PDE6BP35913 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.85■□□□□ 0.77
PDE6BP35913 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDE6BP35913 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PDE6BP35913 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 TOMM22P5-201ENST00000416399 439 ntBASIC19.85■□□□□ 0.77
PDE6BP35913 AC074338.1-201ENST00000416825 156 ntBASIC19.85■□□□□ 0.77
PDE6BP35913 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.85■□□□□ 0.77
PDE6BP35913 TARDBPP1-201ENST00000442013 1203 ntBASIC19.85■□□□□ 0.77
PDE6BP35913 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.85■□□□□ 0.77
PDE6BP35913 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.85■□□□□ 0.77
PDE6BP35913 AC010328.2-201ENST00000597698 1111 ntBASIC19.85■□□□□ 0.77
PDE6BP35913 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.85■□□□□ 0.77
PDE6BP35913 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms